Last rendered: July 2026 — see
Major Versions for full environment details.
This page documents the R environment used to render the MarineOmics website pages. The goal is to make it easier for others to reproduce the rendered pages in the future.
Version 1 — July 2026
All pages were converted from R Markdown to Quarto and rendered in June–July 2026. A PackRat lockfile (packrat/packrat.lock) is included in the repository, which records the exact versions of all R packages used to render the pages.
To restore the environment from the lockfile:
Note: Bioconductor packages (e.g. DESeq2, edgeR, SeqArray, SNPRelate) are recorded in the lockfile but may need to be installed separately via BiocManager:
R Session Info
R version 4.5.3 (2026-03-11)
Platform: aarch64-apple-darwin20
Running under: macOS Sonoma 14.6
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.1
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: America/New_York
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] htmlwidgets_1.6.4 compiler_4.5.3 fastmap_1.2.0 cli_3.6.6
[5] tools_4.5.3 htmltools_0.5.9 otel_0.2.0 rstudioapi_0.18.0
[9] yaml_2.3.12 rmarkdown_2.31 knitr_1.51 jsonlite_2.0.0
[13] xfun_0.57 digest_0.6.39 rlang_1.2.0 evaluate_1.0.5